TAP AS2/LOB in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

DUF260
Homeobox
bZIP_1
bZIP_2
HLH

(Domain names are clickable)



List of proteins (40)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0038s0001.1.ppacid=28918752 transcript=Cagra.0038s0001.1 locus=Cagra.0038s0001 ID=Cagra.0038s0001.1.v1.1 annot-version=v1.1
Cagra.0342s0030.1.ppacid=28909916 transcript=Cagra.0342s0030.1 locus=Cagra.0342s0030 ID=Cagra.0342s0030.1.v1.1 annot-version=v1.1
Cagra.0567s0001.1.ppacid=28910741 transcript=Cagra.0567s0001.1 locus=Cagra.0567s0001 ID=Cagra.0567s0001.1.v1.1 annot-version=v1.1
Cagra.0686s0035.1.ppacid=28901017 transcript=Cagra.0686s0035.1 locus=Cagra.0686s0035 ID=Cagra.0686s0035.1.v1.1 annot-version=v1.1
Cagra.0686s0036.1.ppacid=28900994 transcript=Cagra.0686s0036.1 locus=Cagra.0686s0036 ID=Cagra.0686s0036.1.v1.1 annot-version=v1.1
Cagra.0698s0021.1.ppacid=28896230 transcript=Cagra.0698s0021.1 locus=Cagra.0698s0021 ID=Cagra.0698s0021.1.v1.1 annot-version=v1.1
Cagra.0698s0022.1.ppacid=28896220 transcript=Cagra.0698s0022.1 locus=Cagra.0698s0022 ID=Cagra.0698s0022.1.v1.1 annot-version=v1.1
Cagra.0736s0021.1.ppacid=28899798 transcript=Cagra.0736s0021.1 locus=Cagra.0736s0021 ID=Cagra.0736s0021.1.v1.1 annot-version=v1.1
Cagra.0824s0026.1.ppacid=28900036 transcript=Cagra.0824s0026.1 locus=Cagra.0824s0026 ID=Cagra.0824s0026.1.v1.1 annot-version=v1.1
Cagra.0926s0014.1.ppacid=28911424 transcript=Cagra.0926s0014.1 locus=Cagra.0926s0014 ID=Cagra.0926s0014.1.v1.1 annot-version=v1.1
Cagra.0926s0015.1.ppacid=28911347 transcript=Cagra.0926s0015.1 locus=Cagra.0926s0015 ID=Cagra.0926s0015.1.v1.1 annot-version=v1.1
Cagra.1013s0013.1.ppacid=28916256 transcript=Cagra.1013s0013.1 locus=Cagra.1013s0013 ID=Cagra.1013s0013.1.v1.1 annot-version=v1.1
Cagra.10809s0001.1.ppacid=28913468 transcript=Cagra.10809s0001.1 locus=Cagra.10809s0001 ID=Cagra.10809s0001.1.v1.1 annot-version=v1.1
Cagra.10957s0002.1.ppacid=28896859 transcript=Cagra.10957s0002.1 locus=Cagra.10957s0002 ID=Cagra.10957s0002.1.v1.1 annot-version=v1.1
Cagra.1194s0049.1.ppacid=28912784 transcript=Cagra.1194s0049.1 locus=Cagra.1194s0049 ID=Cagra.1194s0049.1.v1.1 annot-version=v1.1
Cagra.1261s0013.1.ppacid=28895196 transcript=Cagra.1261s0013.1 locus=Cagra.1261s0013 ID=Cagra.1261s0013.1.v1.1 annot-version=v1.1
Cagra.1261s0014.1.ppacid=28895214 transcript=Cagra.1261s0014.1 locus=Cagra.1261s0014 ID=Cagra.1261s0014.1.v1.1 annot-version=v1.1
Cagra.13768s0012.1.ppacid=28907525 transcript=Cagra.13768s0012.1 locus=Cagra.13768s0012 ID=Cagra.13768s0012.1.v1.1 annot-version=v1.1
Cagra.1508s0061.1.ppacid=28905861 transcript=Cagra.1508s0061.1 locus=Cagra.1508s0061 ID=Cagra.1508s0061.1.v1.1 annot-version=v1.1
Cagra.1642s0010.1.ppacid=28898859 transcript=Cagra.1642s0010.1 locus=Cagra.1642s0010 ID=Cagra.1642s0010.1.v1.1 annot-version=v1.1
Cagra.1655s0059.1.ppacid=28902922 transcript=Cagra.1655s0059.1 locus=Cagra.1655s0059 ID=Cagra.1655s0059.1.v1.1 annot-version=v1.1
Cagra.1671s0259.1.ppacid=28914052 transcript=Cagra.1671s0259.1 locus=Cagra.1671s0259 ID=Cagra.1671s0259.1.v1.1 annot-version=v1.1
Cagra.1671s0410.1.ppacid=28914340 transcript=Cagra.1671s0410.1 locus=Cagra.1671s0410 ID=Cagra.1671s0410.1.v1.1 annot-version=v1.1
Cagra.19206s0001.1.ppacid=28898045 transcript=Cagra.19206s0001.1 locus=Cagra.19206s0001 ID=Cagra.19206s0001.1.v1.1 annot-version=v1.1
Cagra.20099s0001.1.ppacid=28900635 transcript=Cagra.20099s0001.1 locus=Cagra.20099s0001 ID=Cagra.20099s0001.1.v1.1 annot-version=v1.1
Cagra.2098s0013.1.ppacid=28919518 transcript=Cagra.2098s0013.1 locus=Cagra.2098s0013 ID=Cagra.2098s0013.1.v1.1 annot-version=v1.1
Cagra.2117s0054.1.ppacid=28905598 transcript=Cagra.2117s0054.1 locus=Cagra.2117s0054 ID=Cagra.2117s0054.1.v1.1 annot-version=v1.1
Cagra.2475s0001.1.ppacid=28896827 transcript=Cagra.2475s0001.1 locus=Cagra.2475s0001 ID=Cagra.2475s0001.1.v1.1 annot-version=v1.1
Cagra.2622s0036.1.ppacid=28895924 transcript=Cagra.2622s0036.1 locus=Cagra.2622s0036 ID=Cagra.2622s0036.1.v1.1 annot-version=v1.1
Cagra.2636s0029.1.ppacid=28904985 transcript=Cagra.2636s0029.1 locus=Cagra.2636s0029 ID=Cagra.2636s0029.1.v1.1 annot-version=v1.1
Cagra.30289s0001.1.ppacid=28915514 transcript=Cagra.30289s0001.1 locus=Cagra.30289s0001 ID=Cagra.30289s0001.1.v1.1 annot-version=v1.1
Cagra.3364s0006.1.ppacid=28903073 transcript=Cagra.3364s0006.1 locus=Cagra.3364s0006 ID=Cagra.3364s0006.1.v1.1 annot-version=v1.1
Cagra.3598s0013.1.ppacid=28906422 transcript=Cagra.3598s0013.1 locus=Cagra.3598s0013 ID=Cagra.3598s0013.1.v1.1 annot-version=v1.1
Cagra.4491s0014.1.ppacid=28895563 transcript=Cagra.4491s0014.1 locus=Cagra.4491s0014 ID=Cagra.4491s0014.1.v1.1 annot-version=v1.1
Cagra.5118s0045.1.ppacid=28905896 transcript=Cagra.5118s0045.1 locus=Cagra.5118s0045 ID=Cagra.5118s0045.1.v1.1 annot-version=v1.1
Cagra.5575s0004.1.ppacid=28903651 transcript=Cagra.5575s0004.1 locus=Cagra.5575s0004 ID=Cagra.5575s0004.1.v1.1 annot-version=v1.1
Cagra.6164s0006.1.ppacid=28896734 transcript=Cagra.6164s0006.1 locus=Cagra.6164s0006 ID=Cagra.6164s0006.1.v1.1 annot-version=v1.1
Cagra.6845s0054.1.ppacid=28894055 transcript=Cagra.6845s0054.1 locus=Cagra.6845s0054 ID=Cagra.6845s0054.1.v1.1 annot-version=v1.1
Cagra.6952s0010.1.ppacid=28900300 transcript=Cagra.6952s0010.1 locus=Cagra.6952s0010 ID=Cagra.6952s0010.1.v1.1 annot-version=v1.1
Cagra.9128s0007.1.ppacid=28909597 transcript=Cagra.9128s0007.1 locus=Cagra.9128s0007 ID=Cagra.9128s0007.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum